Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ANL57567.1Lysine decarboxylase protein; Protein involved in catalytic activity, pyridoxal phosphate binding and cellular amino acid metabolic process. (753 aa)    
Predicted Functional Partners:
speB-1
Agmatinase 1; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines and metal ion binding; Belongs to the arginase family.
    
 0.913
arcB
Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family.
    
 0.912
potE
Putrescine-ornithine antiporter protein PotE; Protein involved in amino acid transmembrane transporter activity and amino acid transmembrane transport.
 
  
 0.861
arcA
Protein involved in arginine deiminase activity and arginine catabolic process.
    
 0.824
argH
Argininosuccinate lyase; Protein involved in catalytic activity and arginine biosynthetic process via ornithine.
     
 0.823
speF
Ornithine decarboxylase; Protein involved in catalytic activity, pyridoxal phosphate binding and cellular amino acid metabolic process.
 
    
0.811
ANL57564.1
Amino acid ABC transporter substrate-binding protein; Protein involved in transporter activity and transport.
 
   
 0.748
ANL60553.1
Protein involved in ATP binding and ATPase activity.
   
 
 0.655
ANL57568.1
Protein involved in cation transmembrane transporter activity, cation transport and transmembrane transport.
       0.472
ANL57562.1
Ion transport 2 family protein.
       0.447
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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