Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL57572.1 | arcA | AMC85_CH00129 | AMC85_CH00130 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in arginine deiminase activity and arginine catabolic process. | 0.998 |
| ANL57572.1 | arcB | AMC85_CH00129 | AMC85_CH04109 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | 0.910 |
| ANL57572.1 | arcC | AMC85_CH00129 | AMC85_CH00128 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in carbamate kinase activity and arginine metabolic process; Belongs to the carbamate kinase family. | 0.998 |
| ANL57572.1 | argB | AMC85_CH00129 | AMC85_CH00468 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.876 |
| ANL57572.1 | argF | AMC85_CH00129 | AMC85_CH00562 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.916 |
| ANL57572.1 | argG-1 | AMC85_CH00129 | AMC85_CH02686 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.976 |
| ANL57572.1 | argG-2 | AMC85_CH00129 | AMC85_CH04186 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.976 |
| ANL57572.1 | argJ | AMC85_CH00129 | AMC85_CH03950 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.986 |
| ANL57572.1 | carA | AMC85_CH00129 | AMC85_CH03114 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl phosphate synthetase small subunit; Belongs to the CarA family. | 0.903 |
| ANL57572.1 | carB | AMC85_CH00129 | AMC85_CH03123 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl phosphate synthetase large subunit; Protein involved in ATP binding, ligase activity and nitrogen compound metabolic process; Belongs to the CarB family. | 0.900 |
| arcA | ANL57572.1 | AMC85_CH00130 | AMC85_CH00129 | Protein involved in arginine deiminase activity and arginine catabolic process. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.998 |
| arcA | arcB | AMC85_CH00130 | AMC85_CH04109 | Protein involved in arginine deiminase activity and arginine catabolic process. | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | 0.831 |
| arcA | arcC | AMC85_CH00130 | AMC85_CH00128 | Protein involved in arginine deiminase activity and arginine catabolic process. | Protein involved in carbamate kinase activity and arginine metabolic process; Belongs to the carbamate kinase family. | 0.994 |
| arcA | argF | AMC85_CH00130 | AMC85_CH00562 | Protein involved in arginine deiminase activity and arginine catabolic process. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.987 |
| arcA | argG-1 | AMC85_CH00130 | AMC85_CH02686 | Protein involved in arginine deiminase activity and arginine catabolic process. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.915 |
| arcA | argG-2 | AMC85_CH00130 | AMC85_CH04186 | Protein involved in arginine deiminase activity and arginine catabolic process. | Protein involved in argininosuccinate synthase activity, ATP binding and arginine biosynthetic process; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.915 |
| arcB | ANL57572.1 | AMC85_CH04109 | AMC85_CH00129 | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.910 |
| arcB | arcA | AMC85_CH04109 | AMC85_CH00130 | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | Protein involved in arginine deiminase activity and arginine catabolic process. | 0.831 |
| arcB | argF | AMC85_CH04109 | AMC85_CH00562 | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.910 |
| arcB | argJ | AMC85_CH04109 | AMC85_CH03950 | Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.914 |
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