STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhtCThreonine efflux protein RhtC; Protein involved in amino acid transport. (210 aa)    
Predicted Functional Partners:
ANL61049.1
Protein involved in amino acid transport.
  
    0.772
ANL58903.1
Protein involved in amino acid transport.
  
     0.769
ANL61510.1
Protein involved in amino acid transport.
  
     0.768
ANL61352.1
Protein involved in amino acid transport.
  
     0.765
ANL58706.1
Protein involved in amino acid transport.
  
     0.762
ANL57800.1
Protein involved in amino acid transport.
  
     0.727
ANL57695.1
Type II secretion system F domain-containing protein.
       0.498
cpaF-1
Flp pilus assembly ATP-binding protein CpaF 1; Protein involved in ATP binding and transport.
       0.478
ANL57694.1
Type II secretion system F domain-containing protein.
       0.478
cpaE
Flp pilus assembly ATP-binding protein CpaE.
       0.439
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.