STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybaKCys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Protein involved in regulation of transcription, DNA-dependent; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (168 aa)    
Predicted Functional Partners:
ANL57759.1
Arsenate reductase protein; Belongs to the ArsC family.
 
     0.824
ANL57760.1
Succinylglutamate desuccinylase/aspartoacylase protein; Protein involved in hydrolase activity, acting on ester bonds and metabolic process.
       0.567
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.517
fliE
Flagellar hook basal body protein FliE.
    
   0.517
flgD
Flagellar basal body rod modification protein FlgD.
    
   0.517
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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