STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL57759.1Arsenate reductase protein; Belongs to the ArsC family. (116 aa)    
Predicted Functional Partners:
ANL59545.1
DSBA-like thioredoxin protein; Protein involved in protein disulfide oxidoreductase activity.
   
 
 0.887
ybaK
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Protein involved in regulation of transcription, DNA-dependent; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
 
     0.824
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.765
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.700
ANL59361.1
NADH dehydrogenase ubiquinone Fe-S protein; Protein involved in oxidoreductase activity, acting on NADH or NADPH and electron transport chain.
     
 0.642
arsC
Protein involved in arsenate reductase (glutaredoxin) activity and oxidation-reduction process.
   
  
 0.563
ANL57760.1
Succinylglutamate desuccinylase/aspartoacylase protein; Protein involved in hydrolase activity, acting on ester bonds and metabolic process.
       0.541
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.480
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.463
rpoH-1
RNA polymerase sigma-32 factor RpoH 1; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
    
   0.463
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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