STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL57794.1Restriction endonuclease type 2-like protein; Protein involved in nucleic acid binding and nuclease activity; Belongs to the UPF0102 family. (122 aa)    
Predicted Functional Partners:
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.794
ANL61268.1
Protein involved in nucleoside metabolic process.
 
    0.632
ANL58465.1
GGDEF/EAL domain-containing protein; Protein involved in protein binding, regulation of transcription, DNA-dependent and signal transduction.
   
    0.549
ANL59602.1
GGDEF/EAL domain-containing protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
    0.549
ANL57797.1
Mg chelatase-related protein; Protein involved in nucleotide binding, nucleoside-triphosphatase activity, photosynthesis and chlorophyll biosynthetic process.
 
  
 0.526
ANL57795.1
Cupin domain-containing protein.
       0.519
ANL59110.1
Protein involved in DNA mediated transformation.
 
    0.479
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
       0.464
ANL58633.1
GGDEF/EAL domain-containing protein; Protein involved in phosphorus-oxygen lyase activity, cyclic nucleotide biosynthetic process and intracellular signal transduction.
   
    0.429
gshB
Glutathione synthetase; Protein involved in ATP binding, ligase activity and glutathione biosynthetic process; Belongs to the prokaryotic GSH synthase family.
       0.420
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.