STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL57808.1GFA family glutathione-dependent formaldehyde-activating protein; Protein involved in carbon-sulfur lyase activity and metabolic process. (133 aa)    
Predicted Functional Partners:
ANL57809.1
Protein involved in serine-type carboxypeptidase activity and proteolysis.
       0.773
ANL58578.1
GFA family glutathione-dependent formaldehyde-activating protein; Protein involved in carbon-sulfur lyase activity and metabolic process.
  
     0.749
ANL59204.1
Protein involved in carbon-sulfur lyase activity and metabolic process.
  
     0.698
ANL58627.1
Toxin-antitoxin system toxin RelE/ParE family protein.
      
 0.613
ANL57810.1
Major facilitator superfamily protein; Protein involved in transmembrane transport.
       0.512
ANL57811.1
GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.
       0.512
gyrB-2
DNA gyrase subunit B 2; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
      
 0.451
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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