Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL57809.1Protein involved in serine-type carboxypeptidase activity and proteolysis. (509 aa)    
Predicted Functional Partners:
ANL57808.1
GFA family glutathione-dependent formaldehyde-activating protein; Protein involved in carbon-sulfur lyase activity and metabolic process.
       0.773
aroE-1
Shikimate 5-dehydrogenase 1; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
    
   0.631
ANL60134.1
Protein involved in catalytic activity, cation binding and carbohydrate metabolic process.
   
 0.605
ANL57810.1
Major facilitator superfamily protein; Protein involved in transmembrane transport.
       0.512
ANL57811.1
GntR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.
       0.512
ANL58023.1
Peptidoglycan-binding domain-containing protein; Protein involved in binding and metabolic process.
    
 
 0.423
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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