STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutU-1Urocanate hydratase 1; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (553 aa)    
Predicted Functional Partners:
ANL57823.1
Phenylalanine/histidine ammonia-lyase protein; Protein involved in catalytic activity and biosynthetic process.
 
 0.999
ANL57820.1
Hypothetical protein.
 
   
 0.671
ANL57822.1
Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds.
 
     0.575
ANL57821.1
Allantoate amidohydrolase protein; Protein involved in hydrolase activity and metabolic process.
 
     0.528
ANL61083.1
N-formylglutamate amidohydrolase protein; Protein involved in N-acetylmuramoyl-L-alanine amidase activity and peptidoglycan catabolic process.
  
  
 0.522
arcB
Arginase; Protein involved in arginase activity, metal ion binding and arginine metabolic process; Belongs to the arginase family.
 
  
 0.482
ANL57819.1
Hypothetical protein.
       0.429
speB-1
Agmatinase 1; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines and metal ion binding; Belongs to the arginase family.
  
  
 0.405
speB-2
Agmatinase 2; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines and metal ion binding; Belongs to the arginase family.
  
  
 0.405
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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