Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL59475.1 | ANL61560.1 | AMC85_CH02098 | AMC85_CH04239 | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | 0.923 |
| ANL59475.1 | ubiA | AMC85_CH02098 | AMC85_CH00963 | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | UbiA prenyltransferase family protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.645 |
| ANL59475.1 | ubiB | AMC85_CH02098 | AMC85_CH00391 | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.611 |
| ANL59475.1 | ubiE | AMC85_CH02098 | AMC85_CH00392 | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Bifunctional 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase/demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.927 |
| ANL59475.1 | ubiG | AMC85_CH02098 | AMC85_CH03940 | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-octaprenyl-6-hydroxyphenyl methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.960 |
| ANL60055.1 | ubiA | AMC85_CH02689 | AMC85_CH00963 | Ubiquinone biosynthesis family protein; Protein involved in oxidoreductase activity, transition metal ion binding, ubiquinone biosynthetic process and oxidation-reduction process; Belongs to the COQ7 family. | UbiA prenyltransferase family protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.487 |
| ANL60055.1 | ubiB | AMC85_CH02689 | AMC85_CH00391 | Ubiquinone biosynthesis family protein; Protein involved in oxidoreductase activity, transition metal ion binding, ubiquinone biosynthetic process and oxidation-reduction process; Belongs to the COQ7 family. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.510 |
| ANL60055.1 | ubiE | AMC85_CH02689 | AMC85_CH00392 | Ubiquinone biosynthesis family protein; Protein involved in oxidoreductase activity, transition metal ion binding, ubiquinone biosynthetic process and oxidation-reduction process; Belongs to the COQ7 family. | Bifunctional 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase/demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.917 |
| ANL60055.1 | ubiG | AMC85_CH02689 | AMC85_CH03940 | Ubiquinone biosynthesis family protein; Protein involved in oxidoreductase activity, transition metal ion binding, ubiquinone biosynthetic process and oxidation-reduction process; Belongs to the COQ7 family. | Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-octaprenyl-6-hydroxyphenyl methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.938 |
| ANL61560.1 | ANL59475.1 | AMC85_CH04239 | AMC85_CH02098 | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Ubiquinone biosynthesis hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | 0.923 |
| ANL61560.1 | ubiA | AMC85_CH04239 | AMC85_CH00963 | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | UbiA prenyltransferase family protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.655 |
| ANL61560.1 | ubiB | AMC85_CH04239 | AMC85_CH00391 | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.465 |
| ANL61560.1 | ubiE | AMC85_CH04239 | AMC85_CH00392 | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Bifunctional 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase/demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.929 |
| ANL61560.1 | ubiG | AMC85_CH04239 | AMC85_CH03940 | 2-octaprenyl-6-methoxyphenyl hydroxylase protein; Protein involved in oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, flavin adenine dinucleotide binding, ubiquinone biosynthetic process and oxidation-reduction process. | Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-octaprenyl-6-hydroxyphenyl methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.957 |
| fadB | mutM | AMC85_CH00394 | AMC85_CH00393 | enoyl-CoA hydratase; Protein involved in catalytic activity and metabolic process; Belongs to the enoyl-CoA hydratase/isomerase family. | Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.737 |
| fadB | ubiB | AMC85_CH00394 | AMC85_CH00391 | enoyl-CoA hydratase; Protein involved in catalytic activity and metabolic process; Belongs to the enoyl-CoA hydratase/isomerase family. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.450 |
| fadB | ubiE | AMC85_CH00394 | AMC85_CH00392 | enoyl-CoA hydratase; Protein involved in catalytic activity and metabolic process; Belongs to the enoyl-CoA hydratase/isomerase family. | Bifunctional 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase/demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.533 |
| mutM | fadB | AMC85_CH00393 | AMC85_CH00394 | Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | enoyl-CoA hydratase; Protein involved in catalytic activity and metabolic process; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.737 |
| mutM | ubiB | AMC85_CH00393 | AMC85_CH00391 | Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.543 |
| mutM | ubiE | AMC85_CH00393 | AMC85_CH00392 | Bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | Bifunctional 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase/demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.648 |
page 1 of 3