Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANL57874.1Signal peptide peptidase SppA-like protein; Protein involved in peptidase activity and proteolysis. (316 aa)    
Predicted Functional Partners:
ihfB
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
  
    0.749
ANL57875.1
Lipopolysccharide assembly LptC-related protein.
 
     0.577
ANL57876.1
Organic solvent tolerance OstA-like protein.
 
     0.576
ANL57872.1
Hypothetical protein.
 
     0.544
ANL57877.1
ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.
 
   
 0.542
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
 
  
 0.517
ANL61122.1
Tetratricopeptide repeat-containing protein; Protein involved in protein binding.
 
  
 0.452
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
  
 0.412
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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