Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL57973.1IS5 family insertion sequence transposase protein. (125 aa)    
Predicted Functional Partners:
ANL57972.1
IS5 family insertion sequence transposase protein.
     0.950
ANL58483.1
IS5 family insertion sequence transposase protein.
     0.789
ANL60022.1
IS5 family insertion sequence transposase protein.
     0.789
ANL60098.1
IS5 family insertion sequence transposase protein.
     0.789
ANL61243.1
IS5 family insertion sequence transposase protein.
     0.789
ANL57974.1
Hypothetical protein.
       0.495
ANL57971.1
Major facilitator superfamily protein; Protein involved in transmembrane transport.
       0.475
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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