STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL57989.1GcrA family cell cycle regulator protein. (177 aa)    
Predicted Functional Partners:
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 
 0.915
atpF
ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.699
ccrM
Site-specific (adenine-specific) DNA-methyltransferase; Protein involved in DNA binding, N-methyltransferase activity and DNA methylation; Belongs to the N(4)/N(6)-methyltransferase family.
  
   
 0.663
ANL58334.1
Hypothetical protein.
  
     0.625
ANL61259.1
Hypothetical protein.
  
     0.615
hisS
histidyl-tRNA synthetase; Protein involved in nucleotide binding, histidine-tRNA ligase activity, ATP binding and histidyl-tRNA aminoacylation.
  
     0.604
ANL61289.1
Disulfide bond formation DsbB-like protein; Protein involved in protein disulfide oxidoreductase activity.
  
     0.600
ANL57996.1
Protein involved in dCTP deaminase activity.
  
     0.587
ANL59339.1
Protein involved in NADH dehydrogenase (ubiquinone) activity and electron carrier activity.
  
   
 0.575
ANL60280.1
Stringent starvation protein B.
  
   
 0.567
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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