STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58187.1XRE family transcriptional regulator protein; Protein involved in DNA binding. (469 aa)    
Predicted Functional Partners:
aceA
Isocitrate lyase; Protein involved in catalytic activity and carboxylic acid metabolic process.
 
   
 0.812
ANL58185.1
Hypothetical protein.
 
     0.721
tlyA
Hemolysin protein TlyA; Protein involved in RNA binding, methyltransferase activity and hemolysis by symbiont of host erythrocytes.
 
   
 0.608
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
   
 0.596
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
   
  
 0.584
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
      
 0.565
potF
Prutescine ABC transporter substrate-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
       0.543
ANL58930.1
Protein involved in 2-methylcitrate dehydratase activity and propionate catabolic process.
  
  
 0.535
folC
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Protein involved in ATP binding, ligase activity and biosynthetic process; Belongs to the folylpolyglutamate synthase family.
     
 0.520
hisS
histidyl-tRNA synthetase; Protein involved in nucleotide binding, histidine-tRNA ligase activity, ATP binding and histidyl-tRNA aminoacylation.
      
 0.516
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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