STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58202.1Iron-responsive transcriptional regulator protein. (160 aa)    
Predicted Functional Partners:
nifS-1
Cysteine desulfurase 1; Protein involved in catalytic activity, pyridoxal phosphate binding and metabolic process.
  
  
 0.704
nifU-2
Fe-S cluster assembly protein NifU 2; Protein involved in iron ion binding, iron-sulfur cluster binding and iron-sulfur cluster assembly.
  
  
 0.500
ANL58776.1
Pyridoxamine 5'-phosphate oxidase-like protein; Protein involved in FMN binding, oxidoreductase activity and oxidation-reduction process.
  
  
 0.476
iolA
Methylmalonate-semialdehyde dehydrogenase (acylating); Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
       0.413
dppA
Dipeptide ABC transporter substrate-binding protein DppA; Protein involved in transporter activity and transport.
       0.400
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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