Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dppDDipeptide ABC transporter ATP-binding protein DppD; Protein involved in ATP binding, ATPase activity and peptide transport; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
dppC
Dipeptide ABC transporter permease protein DppC; Protein involved in transporter activity and transport.
 0.999
dppB
Dipeptide ABC transporter permease protein DppB; Protein involved in transporter activity and transport.
 
 0.994
dppF
Dipeptide ABC transporter ATP-binding protein DppF; Protein involved in ATP binding, ATPase activity and peptide transport; Belongs to the ABC transporter superfamily.
 
 
0.983
dppA
Dipeptide ABC transporter substrate-binding protein DppA; Protein involved in transporter activity and transport.
 
 0.972
ANL59507.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.965
ANL58076.1
Oligopeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.959
ANL61579.1
Dipeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.958
ANL57702.1
Peptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 0.930
oppC
Oligopeptide ABC transporter permease protein OppC; Protein involved in transporter activity and transport.
 
 0.922
ANL58077.1
Oligopeptide ABC transporter permease protein; Protein involved in transporter activity and transport.
 
 
 0.893
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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