STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idnK-1Gluconokinase 1; Protein involved in kinase activity, ATP binding and carbohydrate metabolic process. (179 aa)    
Predicted Functional Partners:
gnd
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.952
ANL60990.1
6-phosphogluconate dehydrogenase-related protein; Protein involved in nucleotide binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, coenzyme binding and oxidation-reduction process.
   
 0.846
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.803
dppC
Dipeptide ABC transporter permease protein DppC; Protein involved in transporter activity and transport.
       0.685
dppF
Dipeptide ABC transporter ATP-binding protein DppF; Protein involved in ATP binding, ATPase activity and peptide transport; Belongs to the ABC transporter superfamily.
       0.685
dppD
Dipeptide ABC transporter ATP-binding protein DppD; Protein involved in ATP binding, ATPase activity and peptide transport; Belongs to the ABC transporter superfamily.
       0.682
dppB
Dipeptide ABC transporter permease protein DppB; Protein involved in transporter activity and transport.
       0.676
dppA
Dipeptide ABC transporter substrate-binding protein DppA; Protein involved in transporter activity and transport.
       0.478
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 
 0.444
zwf-2
Glucose-6-phosphate 1-dehydrogenase 2; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 
 0.417
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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