Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58212.1Tetratricopeptide repeat-containing protein; Protein involved in protein binding. (178 aa)    
Predicted Functional Partners:
ANL58214.1
Anti-sigma factor protein.
 
     0.867
rpoE-1
RNA polymerase sigma-24 factor RpoE 1; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.693
ANL60582.1
Hypothetical protein.
  
     0.656
ANL60133.1
Hypothetical protein.
  
     0.533
ANL58211.1
Chalcone synthase protein; Protein involved in catalytic activity and metabolic process.
       0.516
ANL58210.1
Protein involved in protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity and C-terminal protein methylation.
       0.513
ANL60572.1
Hypothetical protein.
  
     0.480
ANL58581.1
Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
  
 
 0.465
degP-1
Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family.
  
 
 0.421
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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