Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58296.1Outer membrane protein. (231 aa)    
Predicted Functional Partners:
ANL58924.1
Phosphatidic acid phosphatase protein; Protein involved in catalytic activity.
      
 0.818
acpXL
Protein involved in acyl carrier activity.
   
  
 0.585
ANL58297.1
L,D-transpeptidase domain-containing protein; Protein involved in transferase activity.
       0.526
ANL59241.1
Transcriptional activator HlyU-like protein.
  
     0.401
ANL58533.1
TerR family transcriptional regulator protein; Protein involved in DNA binding.
  
     0.400
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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