STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (145 aa)    
Predicted Functional Partners:
rsmD
rRNA methyltransferase RsmD; Protein involved in methyltransferase activity and rRNA methylation.
 
    0.690
cpaD
Pilus biogenesis protein CpaD.
      
 0.675
hisE
phosphoribosyl-ATP pyrophosphatase.
   
    0.645
ANL57852.1
Protein involved in metalloendopeptidase activity and proteolysis.
 
  
 0.615
ANL59110.1
Protein involved in DNA mediated transformation.
      
 0.611
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.599
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
  
 0.583
ANL58321.1
RsuA/RluB/C/D/E/F family pseudouridylate synthase protein; Protein involved in RNA binding, pseudouridine synthase activity, pseudouridine synthesis and RNA modification; Belongs to the pseudouridine synthase RsuA family.
       0.582
cpaE
Flp pilus assembly ATP-binding protein CpaE.
      
 0.558
ANL57847.1
Phosphate starvation inducible PhoH-like protein; Protein involved in ATP binding.
  
     0.553
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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