Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (145 aa)    
Predicted Functional Partners:
cpaD
Pilus biogenesis protein CpaD.
      
 0.874
ANL59426.1
ComEC/Rec2-related protein.
      
 0.761
ctpA
Carboxy-terminal processing protease; Protein involved in serine-type peptidase activity and proteolysis; Belongs to the peptidase S41A family.
     
 0.752
gyrB-2
DNA gyrase subunit B 2; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
     
 0.745
cpaE
Flp pilus assembly ATP-binding protein CpaE.
      
 0.741
rsmD
rRNA methyltransferase RsmD; Protein involved in methyltransferase activity and rRNA methylation.
 
     0.726
hisE
phosphoribosyl-ATP pyrophosphatase.
   
  
 0.668
ANL57852.1
Protein involved in metalloendopeptidase activity and proteolysis.
 
  
 0.604
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.599
ANL58321.1
RsuA/RluB/C/D/E/F family pseudouridylate synthase protein; Protein involved in RNA binding, pseudouridine synthase activity, pseudouridine synthesis and RNA modification; Belongs to the pseudouridine synthase RsuA family.
       0.596
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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