STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58321.1RsuA/RluB/C/D/E/F family pseudouridylate synthase protein; Protein involved in RNA binding, pseudouridine synthase activity, pseudouridine synthesis and RNA modification; Belongs to the pseudouridine synthase RsuA family. (645 aa)    
Predicted Functional Partners:
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.844
rsmD
rRNA methyltransferase RsmD; Protein involved in methyltransferase activity and rRNA methylation.
 
     0.819
cmk
Protein involved in cytidylate kinase activity, ATP binding and nucleobase-containing compound metabolic process.
 
  
 0.776
ANL58323.1
Protein involved in metabolic process.
       0.759
ANL59298.1
Chromosome segregation/condensation ScpB-like protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.657
ANL59203.1
Exodeoxyribonuclease III xth protein; Protein involved in DNA binding, endonuclease activity and DNA repair.
  
    0.611
xthA
Exodeoxyribonuclease III; Protein involved in DNA binding, endonuclease activity and DNA repair.
  
    0.611
ANL59320.1
Endonuclease/exonuclease/phosphatase family protein.
  
    0.611
ANL61554.1
Exodeoxyribonuclease III xth protein; Protein involved in nuclease activity and DNA repair.
  
    0.611
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.582
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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