Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58334.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
ANL60848.1
Hypothetical protein.
  
   
 0.769
ANL60841.1
Helix-turn-helix domain-containing protein.
  
     0.744
ANL59375.1
Zinc-finger CHCC-type domain-containing protein.
  
   
 0.735
ANL61051.1
Hypothetical protein.
  
     0.731
ANL60844.1
Hypothetical protein.
  
     0.727
ANL59654.1
Hypothetical protein.
  
     0.703
ANL58877.1
Hypothetical protein.
  
     0.695
ANL60847.1
Hypothetical protein.
  
     0.695
ANL61008.1
Hypothetical protein.
  
     0.681
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
       0.675
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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