STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgoA2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Protein involved in catalytic activity and metabolic process. (210 aa)    
Predicted Functional Partners:
dgoK
2-dehydro-3-deoxygalactonokinase.
 
  
 0.997
ANL58339.1
SMP-30/gluconolaconase/LRE domain-containing protein.
 
   
 0.869
eda
Bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase; Protein involved in catalytic activity.
  
  
 
0.855
ANL58342.1
Protein involved in oxidoreductase activity and metabolic process.
 
   
 0.825
kdgK
2-dehydro-3-deoxygluconokinase.
 
  
 0.824
uxaC
Protein involved in glucuronate isomerase activity and glucuronate catabolic process.
 
   
 0.764
ANL58343.1
IclR family transcriptional regulator protein; Protein involved in DNA binding and regulation of transcription, DNA-dependent.
 
   
 0.736
dgoD-1
D-galactonate dehydratase 1; Protein involved in catalytic activity and metabolic process.
 
   
 0.687
zwf-1
Glucose-6-phosphate 1-dehydrogenase 1; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.651
zwf-2
Glucose-6-phosphate 1-dehydrogenase 2; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
  
 0.651
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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