STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgoK2-dehydro-3-deoxygalactonokinase. (304 aa)    
Predicted Functional Partners:
dgoA
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Protein involved in catalytic activity and metabolic process.
 
  
 0.997
dgoD-1
D-galactonate dehydratase 1; Protein involved in catalytic activity and metabolic process.
 
 
 0.959
ANL58339.1
SMP-30/gluconolaconase/LRE domain-containing protein.
 
   
 0.894
ANL58342.1
Protein involved in oxidoreductase activity and metabolic process.
 
     0.861
ANL58343.1
IclR family transcriptional regulator protein; Protein involved in DNA binding and regulation of transcription, DNA-dependent.
 
   
 0.660
ANL57967.1
D-galactarate dehydratase/altronate hydrolase protein; Protein involved in hydro-lyase activity.
  
  
 0.623
ANL58927.1
Protein involved in nucleotide binding.
 
     0.576
ilvD-2
Dihydroxy-acid dehydratase 2; Protein involved in catalytic activity and metabolic process; Belongs to the IlvD/Edd family.
 
   
 0.492
ANL58338.1
PRC-barrel domain-containing protein.
       0.426
ANL61220.1
Gluconolactonase protein.
 
     0.408
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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