Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL58364.1SAM-dependent methyltransferase protein; Belongs to the methyltransferase superfamily. (264 aa)    
Predicted Functional Partners:
ANL58363.1
Urease accessory domain-containing protein; Protein involved in nickel cation binding, protein complex assembly and urea metabolic process.
       0.824
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.646
ANL58361.1
Tetratricopeptide repeat-containing protein; Protein involved in binding.
 
     0.589
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.547
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
    0.511
ANL58922.1
YjgP/YjgQ family permease protein; Overlaps another CDS with the same product name.
 
     0.485
ANL59739.1
AsmA-like domain-containing protein.
  
     0.440
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.438
ANL60413.1
ATP-dependent RNA helicase YejH protein; Protein involved in catalytic activity, ATP binding and hydrolase activity.
 
     0.434
ANL61318.1
Protein involved in methyltransferase activity and metabolic process.
  
     0.422
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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