Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bioYBiotin transporter protein BioY. (187 aa)    
Predicted Functional Partners:
bioM
Biotin/cobalt ABC transporter ATP-binding protein; Protein involved in nucleotide binding and nucleoside-triphosphatase activity.
 
 
 0.999
ANL58420.1
Biotin/cobalt ABC/ECF transporter permease protein.
 
 0.998
birA
biotin--(acetyl-CoA carboxylase) ligase; Protein involved in biotin-[acetyl-CoA-carboxylase] ligase activity and protein modification process.
 
   
 0.919
ANL58422.1
Hypothetical protein.
       0.495
rosR
Transcriptional regulatory protein RosR; Protein involved in DNA binding, zinc ion binding and regulation of transcription, DNA-dependent.
      
 0.471
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.