STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tldDProtein TldD. (471 aa)    
Predicted Functional Partners:
pmbA
Protein PmbA.
 
 
0.959
ANL58437.1
Protein involved in N-acetyltransferase activity.
       0.766
ANL58439.1
Invasion associated locus B family protein.
       0.457
ANL58436.1
Phosphate transport regulator protein.
  
    0.445
pit
Protein involved in inorganic phosphate transmembrane transporter activity and phosphate ion transport.
       0.442
bamD
Outer membrane assembly protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.422
purB
Adenylosuccinate lyase; Protein involved in catalytic activity and purine ribonucleotide biosynthetic process; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
   
 0.418
nagA
N-acetylglucosamine-6-phosphate deacetylase; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and N-acetylglucosamine metabolic process.
      
 0.410
pepN
Protein involved in metallopeptidase activity, zinc ion binding and proteolysis.
     
 0.405
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.