Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL58528.1GIY-YIG nuclease domain-containing protein. (392 aa)    
Predicted Functional Partners:
ANL58529.1
DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in nucleic acid binding, ATP binding and ATP-dependent helicase activity.
 
  
 0.969
ANL58531.1
Type II restriction enzyme methylase subunit protein.
 
  
 0.959
ANL58530.1
Hypothetical protein.
       0.798
ANL58260.1
Type 1 restriction-modification system protein HsdS; Protein involved in DNA binding and DNA modification.
  
  
 0.724
ANL58252.1
Hypothetical protein.
  
  
 0.709
ANL58261.1
Type I restriction-modification system HsdM subunit protein; Overlaps another CDS with the same product name; Protein involved in site-specific DNA-methyltransferase (adenine-specific) activity, N-methyltransferase activity and DNA methylation.
  
  
 0.660
ANL58262.1
Type I restriction-modification system HsdM subunit protein; Overlaps another CDS with the same product name; Protein involved in site-specific DNA-methyltransferase (adenine-specific) activity, N-methyltransferase activity and DNA methylation.
  
  
 0.660
ANL58532.1
Short-chain dehydrogenase protein; Protein involved in nucleotide binding and metabolic process.
       0.467
ANL60413.1
ATP-dependent RNA helicase YejH protein; Protein involved in catalytic activity, ATP binding and hydrolase activity.
  
  
 0.438
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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