Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58565.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
tolR
Protein involved in transporter activity and protein transport.
  
 
 0.909
ANL60575.1
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor protein; Protein involved in receptor activity, transporter activity and transport.
  
 
 0.850
tolQ
Transporter protein ExbB/TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.845
ANL58566.1
Protein involved in DNA ligase (ATP) activity, DNA repair and DNA recombination.
       0.555
ANL58097.1
Protein involved in two-component response regulator activity, two-component signal transduction system (phosphorelay) and regulation of transcription, DNA-dependent.
  
  
 0.438
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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