Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58570.1NIPSNAP domain-containing protein. (113 aa)    
Predicted Functional Partners:
ANL59280.1
Hypothetical protein.
  
     0.570
ANL58192.1
Outer membrane AsmA-like protein.
   
    0.500
ANL60283.1
AsmA family outer membrane protein.
   
    0.500
ANL60233.1
Hypothetical protein.
  
     0.496
ANL61255.1
Sugar ABC transporter substrate-binding protein.
  
     0.488
ANL58248.1
Hypothetical protein.
  
     0.443
ANL61247.1
Hypothetical protein.
  
     0.435
nepI
Purine ribonucleoside transporter protein NepI; Protein involved in transmembrane transport.
       0.427
ANL60880.1
Cupin 2 domain-containing protein.
  
     0.424
ANL58569.1
Hypothetical protein.
       0.405
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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