STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betITranscriptional regulator BetI; Repressor involved in choline regulation of the bet genes. (211 aa)    
Predicted Functional Partners:
betB
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
     0.915
ANL60584.1
Proline/glycine betaine/choline ABC transporter substrate-binding protein; Protein involved in transporter activity, binding and transport.
 
     0.747
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
  
 0.737
ctpA
Carboxy-terminal processing protease; Protein involved in serine-type peptidase activity and proteolysis; Belongs to the peptidase S41A family.
     
 0.610
aglR
LacI family transcription regulator AglR; Protein involved in DNA binding and regulation of transcription, DNA-dependent.
      
 0.573
ANL60586.1
Proline/glycine betaine/choline ABC transporter ATP-binding protein; Protein involved in choline transmembrane transporter activity, ATPase activity and choline transport.
  
     0.554
ANL60585.1
Proline/glycine betaine/choline ABC transporter permease protein; Protein involved in transporter activity and transport.
 
     0.528
ANL58631.1
Hypothetical protein.
       0.527
deoD
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
      
 0.518
ANL59975.1
AraC family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding and regulation of transcription, DNA-dependent.
  
     0.450
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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