STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58657.1Exonuclease DNA ligase-associated protein. (336 aa)    
Predicted Functional Partners:
ANL58659.1
Protein involved in DNA ligase (ATP) activity, ATP binding, DNA repair and DNA recombination.
 
 0.986
ANL61140.1
WD40/YVTN repeat-like domain-containing protein; Protein involved in protein binding.
    
 0.981
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.880
ANL58211.1
Chalcone synthase protein; Protein involved in catalytic activity and metabolic process.
  
 
 0.867
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.855
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  0.851
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.823
ANL58018.1
DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in ATP binding, hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides and ATP-dependent helicase activity.
 
    0.798
ANL58019.1
Metallophosphoesterase domain-containing protein; Protein involved in hydrolase activity.
 
     0.791
ANL58658.1
Hypothetical protein.
       0.773
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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