Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL60197.1 | rplC | AMC85_CH02834 | AMC85_CH01750 | Chromate resistance exported protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.628 |
| ANL60197.1 | rplM | AMC85_CH02834 | AMC85_CH01630 | Chromate resistance exported protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.648 |
| ANL60197.1 | rplO | AMC85_CH02834 | AMC85_CH01769 | Chromate resistance exported protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.640 |
| ANL60197.1 | rplQ | AMC85_CH02834 | AMC85_CH01777 | Chromate resistance exported protein. | 50S ribosomal protein L17; Protein involved in structural constituent of ribosome and translation. | 0.733 |
| ANL60197.1 | sodB | AMC85_CH02834 | AMC85_CH01287 | Chromate resistance exported protein. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.967 |
| ANL60197.1 | ybeY | AMC85_CH02834 | AMC85_CH00413 | Chromate resistance exported protein. | rRNA maturation factor protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.874 |
| acnA | rnc | AMC85_CH04206 | AMC85_CH01449 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.909 |
| acnA | rplC | AMC85_CH04206 | AMC85_CH01750 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.903 |
| acnA | rplM | AMC85_CH04206 | AMC85_CH01630 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.884 |
| acnA | rplN | AMC85_CH04206 | AMC85_CH01760 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.899 |
| acnA | rplO | AMC85_CH04206 | AMC85_CH01769 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.891 |
| acnA | rplQ | AMC85_CH04206 | AMC85_CH01777 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 50S ribosomal protein L17; Protein involved in structural constituent of ribosome and translation. | 0.904 |
| acnA | sodB | AMC85_CH04206 | AMC85_CH01287 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.965 |
| rnc | acnA | AMC85_CH01449 | AMC85_CH04206 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.909 |
| rnc | rplC | AMC85_CH01449 | AMC85_CH01750 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.933 |
| rnc | rplM | AMC85_CH01449 | AMC85_CH01630 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.957 |
| rnc | rplN | AMC85_CH01449 | AMC85_CH01760 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.892 |
| rnc | rplO | AMC85_CH01449 | AMC85_CH01769 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.928 |
| rnc | rplQ | AMC85_CH01449 | AMC85_CH01777 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L17; Protein involved in structural constituent of ribosome and translation. | 0.939 |
| rnc | sodB | AMC85_CH01449 | AMC85_CH01287 | Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.935 |
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