Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58722.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
ANL58389.1
BA14K-like protein.
  
     0.715
ANL58723.1
Polysaccharide deacetylase protein; Protein involved in catalytic activity and carbohydrate metabolic process.
 
     0.695
ANL60849.1
Chromosome segregation SMC protein.
 
     0.685
ANL57671.1
Hypothetical protein.
  
     0.644
ANL61295.1
Hypoxia induced domain-containing protein.
  
     0.562
ptrB
Protease 2; Protein involved in serine-type endopeptidase activity, serine-type exopeptidase activity and proteolysis.
       0.544
ANL60204.1
Protein involved in hydrolase activity.
  
     0.543
ANL59348.1
Hypothetical protein.
  
     0.520
ANL59820.1
Hypothetical protein.
  
     0.518
ANL58976.1
RDD domain-containing protein.
 
   
 0.491
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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