Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58758.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
ANL59739.1
AsmA-like domain-containing protein.
  
     0.763
ANL59668.1
Hypothetical protein.
  
     0.761
fliM
Flagellar motor switch protein FliM.
  
     0.760
ANL59295.1
Sporulation related domain-containing protein.
  
     0.752
ropA-2
Porin outer membrane protein RopA 2; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.752
ANL60283.1
AsmA family outer membrane protein.
  
     0.752
ANL59802.1
Hypothetical protein.
  
     0.749
ANL58907.1
Hypothetical protein.
  
     0.747
ANL59805.1
Apolipoprotein type protein.
  
     0.747
ropA-3
Porin outer membrane protein RopA 3; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.746
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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