Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccmI-1Cytochrome-c-type biogenesis protein CcmI/CycH 1; Protein involved in binding. (376 aa)    
Predicted Functional Partners:
ccmF-1
Cytochrome-c-type biogenesis protein CcmF/CycK 1; Protein involved in heme transporter activity, heme transport and cytochrome complex assembly.
 
 
 0.988
ccmE-1
Cytochrome-c-type biogenesis protein CcmE/CycJ 1; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.945
ccmH
Cytochrome-c-type biogenesis protein CcmH/CycL; Possible subunit of a heme lyase.
 
  
 0.940
ccmG
Protein involved in oxidoreductase activity and cytochrome complex assembly.
 
  
 0.863
ccmB
Cytochrome-c heme transporter protein CcmB/CycW; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
   
 0.744
ANL58786.1
LipA family surface antigen protein.
 
     0.709
ccmC
Cytochrome-c heme transporter protein CcmC/CycZ; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.642
phoQ
Protein involved in signal transducer activity, protein histidine kinase activity, signal transduction and peptidyl-histidine phosphorylation.
       0.505
ANL60511.1
MarR family transcriptional regulator protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.
  
     0.483
ccmA
Cytochrome-c heme transporter ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
 
   
 0.473
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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