STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58815.1Aminotransferase family protein; Protein involved in catalytic activity and pyridoxal phosphate binding; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)    
Predicted Functional Partners:
speB-1
Agmatinase 1; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines and metal ion binding; Belongs to the arginase family.
  
 
  0.944
ANL61145.1
ornithine/DAP/Arg decarboxylase protein; Protein involved in catalytic activity and polyamine biosynthetic process; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.908
ANL61650.1
Aldehyde dehydrogenase (NAD(+)) protein; Protein involved in oxidoreductase activity, oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, metabolic process and oxidation-reduction process.
    
 0.903
speF
Ornithine decarboxylase; Protein involved in catalytic activity, pyridoxal phosphate binding and cellular amino acid metabolic process.
    
 0.902
ANL58814.1
Protein involved in catalytic activity, glutamine biosynthetic process and nitrogen compound metabolic process; Belongs to the glutamine synthetase family.
    0.833
ANL58178.1
Protein involved in catalytic activity, glutamine biosynthetic process and nitrogen compound metabolic process; Belongs to the glutamine synthetase family.
    0.751
ordL
FAD dependent oxidoreductase; Protein involved in oxidoreductase activity and oxidation-reduction process.
 
   
 0.722
ANL61649.1
Protein involved in oxidoreductase activity and oxidation-reduction process.
 
   
 0.560
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
  
 0.493
hemA-1
5-aminolevulinate synthase 1; Protein involved in catalytic activity, pyridoxal phosphate binding and tetrapyrrole biosynthetic process.
  
  
 0.493
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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