Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL58849.1Alpha/beta hydrolase family protein. (298 aa)    
Predicted Functional Partners:
ANL58850.1
Lytic murein transglycosylase-related protein; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds.
       0.680
acpP
Acyl carrier protein AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.649
dapA-1
Dihydrodipicolinate synthase 1; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.522
ANL58026.1
acyl-CoA dehydrogenase protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
  
  0.509
ANL58392.1
acyl-CoA dehydrogenase protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
  
  0.503
ANL59114.1
acyl-CoA dehydrogenase protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, metabolic process and oxidation-reduction process.
   
  0.421
gcdH-1
glutaryl-CoA dehydrogenase 1; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
   
  0.421
ANL60875.1
Sulfur acquisition oxidoreductase SfnB family protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
   
  0.421
ANL61639.1
acyl-CoA dehydrogenase protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
   
  0.421
smpB
SsrA-binding protein SmpB; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switch [...]
       0.420
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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