STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANL58862.1Crp family transcriptional regulator protein. (250 aa)    
Predicted Functional Partners:
ANL61097.1
Adenylate cyclase protein; Protein involved in protein binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.
   
 0.900
ANL58863.1
Response regulator CheY-like domain-containing protein.
 
 
 
 0.704
ANL59804.1
Sensor histidine kinase domain-containing protein; Protein involved in signal transducer activity and two-component signal transduction system (phosphorelay).
  
   
 0.649
ANL60791.1
Response regulator protein; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity, transcription initiation, DNA-dependent and regulation of transcription, DNA-dependent.
 
 
 0.569
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
 
 0.557
fixK-1
Nitrogen fixation transcriptional regulator FixK 1; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-dependent.
  
     0.542
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.531
lepB
Signal peptidase I; Protein involved in serine-type peptidase activity and proteolysis; Belongs to the peptidase S26 family.
     
 0.530
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.521
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.508
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.