STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sodCSuperoxide dismutase (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (171 aa)    
Predicted Functional Partners:
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.969
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.920
petA
Ubiquinol--cytochrome-c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.891
ANL59717.1
GLE1 domain-containing protein.
    
   0.881
pfpI
Intracellular protease; Protein involved in hydrolase activity, acting on glycosyl bonds.
 
 
 0.651
ANL61550.1
Protein involved in oxidoreductase activity and oxidation-reduction process.
  
 
 0.646
soxR
Redox-sensitive transcriptional activator SoxR; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, iron ion binding, regulation of transcription, DNA-dependent and response to oxidative stress.
      
 0.643
ANL57739.1
NTF2 domain-containing protein.
  
 
 0.600
ANL60110.1
Intracellular protease/amidase ThiJ/PfpI family protein.
  
 
 0.600
ANL57935.1
Manganese catalase protein; Protein involved in oxidoreductase activity, transition metal ion binding and oxidation-reduction process.
   
 
 0.591
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.