Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sodCSuperoxide dismutase (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (171 aa)    
Predicted Functional Partners:
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.997
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.849
ANL59272.1
Protein involved in peroxiredoxin activity, oxidoreductase activity and oxidation-reduction process.
   
 
 0.842
pfpI
Intracellular protease; Protein involved in hydrolase activity, acting on glycosyl bonds.
 
 
 0.827
soxR
Redox-sensitive transcriptional activator SoxR; Protein involved in DNA binding, sequence-specific DNA binding transcription factor activity, iron ion binding, regulation of transcription, DNA-dependent and response to oxidative stress.
      
 0.825
cbbT
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
   0.799
ANL57739.1
NTF2 domain-containing protein.
  
 
 0.793
ANL60110.1
Intracellular protease/amidase ThiJ/PfpI family protein.
  
 
 0.793
tpiA-1
Triosephosphate isomerase 1; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
 
 0.769
gap
Glyceraldehyde 3-phosphate dehydrogenase; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, NADP binding, NAD binding and oxidation-reduction process; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.756
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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