Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL58875.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
ANL58876.1
Hypothetical protein.
 
     0.897
ANL60283.1
AsmA family outer membrane protein.
  
     0.749
ANL60523.1
Hypothetical protein.
  
     0.737
ANL58872.1
Tyrosine phosphatase family protein.
 
     0.734
ANL59654.1
Hypothetical protein.
  
     0.730
ANL61476.1
Outer membrane lipoprotein; Protein involved in endopeptidase inhibitor activity.
  
     0.717
ANL57505.1
Hypothetical protein.
  
     0.705
ANL58874.1
Protein involved in aminomethyltransferase activity and glycine catabolic process; Belongs to the GcvT family.
 
     0.705
ANL59834.1
Hypothetical protein.
  
     0.688
ANL59547.1
Invasion associated locus B family protein.
  
     0.679
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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