Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pip-1Proline iminopeptidase 1; Protein involved in aminopeptidase activity and proteolysis; Belongs to the peptidase S33 family. (320 aa)    
Predicted Functional Partners:
pip-2
Proline iminopeptidase 2; Protein involved in aminopeptidase activity and proteolysis; Belongs to the peptidase S33 family.
  
  
 
0.905
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.901
ANL58896.1
GFA family glutathione-dependent formaldehyde-activating protein; Overlaps another CDS with the same product name; Protein involved in carbon-sulfur lyase activity and metabolic process.
       0.797
ANL58894.1
GFA family glutathione-dependent formaldehyde-activating protein; Overlaps another CDS with the same product name; Protein involved in carbon-sulfur lyase activity and metabolic process.
       0.786
ANL58895.1
GFA family glutathione-dependent formaldehyde-activating protein; Overlaps another CDS with the same product name; Protein involved in carbon-sulfur lyase activity and metabolic process.
       0.778
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
      
 0.694
ANL58892.1
2-isopropylmalate/homocitrate synthase family transferase protein; Protein involved in catalytic activity and leucine biosynthetic process; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.649
acpP
Acyl carrier protein AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.649
cysS
cysteinyl-tRNA synthetase; Protein involved in cysteine-tRNA ligase activity, ATP binding and cysteinyl-tRNA aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.493
ANL58026.1
acyl-CoA dehydrogenase protein; Protein involved in oxidoreductase activity, acting on the CH-CH group of donors, flavin adenine dinucleotide binding, metabolic process and oxidation-reduction process.
   
  0.421
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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