STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptDOrganic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (776 aa)    
Predicted Functional Partners:
ANL58923.1
YjgP/YjgQ family permease protein; Overlaps another CDS with the same product name.
 
  
 0.952
ANL58922.1
YjgP/YjgQ family permease protein; Overlaps another CDS with the same product name.
 
  
 0.942
ANL57876.1
Organic solvent tolerance OstA-like protein.
 
 
 0.931
ANL58920.1
Peptidylprolyl isomerase PpiC-type domain-containing protein; Protein involved in protein folding and protein transport.
 
  
 0.892
ANL59631.1
Peptidylprolyl isomerase PpiC-type domain-containing protein; Protein involved in protein folding and protein transport.
 
  
 0.801
ANL59001.1
SmpA/OmlA family outer membrane protein.
  
  
 0.760
lpxB
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.739
ANL59654.1
Hypothetical protein.
  
     0.729
ANL57875.1
Lipopolysccharide assembly LptC-related protein.
 
   
 0.723
ANL61310.1
Cell division protein.
  
    0.723
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.