STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ropBOuter membrane protein RopB. (211 aa)    
Predicted Functional Partners:
ropA-1
Porin outer membrane protein RopA 1; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.844
ropA-2
Porin outer membrane protein RopA 2; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.786
ropA-3
Porin outer membrane protein RopA 3; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.778
ANL57839.1
Hypothetical protein.
  
     0.761
ANL59654.1
Hypothetical protein.
  
     0.760
ANL58978.1
Hypothetical protein.
  
     0.756
exoR
Exopolysaccharide production negative regulator ExoR; Protein involved in binding.
  
   
 0.740
ANL59805.1
Apolipoprotein type protein.
  
     0.739
ANL59547.1
Invasion associated locus B family protein.
 
     0.731
ANL59834.1
Hypothetical protein.
  
     0.727
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.