STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (192 aa)    
Predicted Functional Partners:
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
 0.999
rfbB-2
dTDP-glucose-4,6-dehydratase 2; Protein involved in nucleotide binding, coenzyme binding and nucleotide-sugar metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.999
rmlA-2
Glucose-1-phosphate thymidylyltransferase 2; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 0.997
rmlA-1
Glucose-1-phosphate thymidylyltransferase 1; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 0.989
rfbB-1
dTDP-glucose-4,6-dehydratase 1; Protein involved in nucleotide binding, coenzyme binding and nucleotide-sugar metabolic process; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 0.959
rkpK
UDP-glucose 6-dehydrogenase; Protein involved in oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, NAD binding and oxidation-reduction process.
  
  
 0.951
ANL58222.1
Protein involved in nucleotidyltransferase activity and biosynthetic process.
 
  
 0.912
ANL60735.1
Protein involved in polysaccharide biosynthetic process.
  
  
 0.863
ANL61277.1
Protein involved in polysaccharide biosynthetic process.
  
  
 0.862
noeJ
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Protein involved in nucleotidyltransferase activity and lipopolysaccharide biosynthetic process; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.845
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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