ANL59014.1 protein (Rhizobium phaseoli) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANL59014.1

Protein involved in catalytic activity and carbohydrate metabolic process. (348 aa)

Predicted Functional Partners:

ANL59012.1

0.962

ANL59013.1

0.960

ANL59015.1

0.953

ANL59016.1

0.578

ANL58581.1

0.528

ANL59011.1

0.511

ANL57519.1

0.433

ANL60572.1

0.400

Your Current Organism:

Rhizobium phaseoli

NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANL57519.1	ANL58581.1	AMC85_CH00075	AMC85_CH01164	Glycosyltransferase family protein.	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	0.698
ANL57519.1	ANL59012.1	AMC85_CH00075	AMC85_CH01602	Glycosyltransferase family protein.	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	0.910
ANL57519.1	ANL59013.1	AMC85_CH00075	AMC85_CH01603	Glycosyltransferase family protein.	BcsB family cellulose synthase subunit protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.922
ANL57519.1	ANL59014.1	AMC85_CH00075	AMC85_CH01604	Glycosyltransferase family protein.	Protein involved in catalytic activity and carbohydrate metabolic process.	0.433
ANL57519.1	ANL59015.1	AMC85_CH00075	AMC85_CH01605	Glycosyltransferase family protein.	Tetratricopeptide repeat-containing protein; Protein involved in binding.	0.512
ANL58581.1	ANL57519.1	AMC85_CH01164	AMC85_CH00075	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Glycosyltransferase family protein.	0.698
ANL58581.1	ANL59012.1	AMC85_CH01164	AMC85_CH01602	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	0.698
ANL58581.1	ANL59013.1	AMC85_CH01164	AMC85_CH01603	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	BcsB family cellulose synthase subunit protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.523
ANL58581.1	ANL59014.1	AMC85_CH01164	AMC85_CH01604	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Protein involved in catalytic activity and carbohydrate metabolic process.	0.528
ANL58581.1	ANL59015.1	AMC85_CH01164	AMC85_CH01605	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	Tetratricopeptide repeat-containing protein; Protein involved in binding.	0.522
ANL59011.1	ANL59012.1	AMC85_CH01601	AMC85_CH01602	Hypothetical protein.	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	0.502
ANL59011.1	ANL59013.1	AMC85_CH01601	AMC85_CH01603	Hypothetical protein.	BcsB family cellulose synthase subunit protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.511
ANL59011.1	ANL59014.1	AMC85_CH01601	AMC85_CH01604	Hypothetical protein.	Protein involved in catalytic activity and carbohydrate metabolic process.	0.511
ANL59011.1	ANL59015.1	AMC85_CH01601	AMC85_CH01605	Hypothetical protein.	Tetratricopeptide repeat-containing protein; Protein involved in binding.	0.511
ANL59012.1	ANL57519.1	AMC85_CH01602	AMC85_CH00075	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	Glycosyltransferase family protein.	0.910
ANL59012.1	ANL58581.1	AMC85_CH01602	AMC85_CH01164	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	Adenylate cyclase family 3 protein; Protein involved in binding, cyclic nucleotide biosynthetic process and intracellular signal transduction.	0.698
ANL59012.1	ANL59011.1	AMC85_CH01602	AMC85_CH01601	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	Hypothetical protein.	0.502
ANL59012.1	ANL59013.1	AMC85_CH01602	AMC85_CH01603	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	BcsB family cellulose synthase subunit protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.994
ANL59012.1	ANL59014.1	AMC85_CH01602	AMC85_CH01604	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	Protein involved in catalytic activity and carbohydrate metabolic process.	0.962
ANL59012.1	ANL59015.1	AMC85_CH01602	AMC85_CH01605	Cellulose synthase subunit CelA protein; Protein involved in cyclic-di-GMP binding and UDP-glucose metabolic process.	Tetratricopeptide repeat-containing protein; Protein involved in binding.	0.967