Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANL59092.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
birA
biotin--(acetyl-CoA carboxylase) ligase; Protein involved in biotin-[acetyl-CoA-carboxylase] ligase activity and protein modification process.
 
     0.620
ANL58761.1
Hypothetical protein.
  
     0.592
ANL59090.1
Protein involved in hydrolase activity.
       0.589
ANL59091.1
methylmalonyl-CoA epimerase protein.
       0.589
ANL60523.1
Hypothetical protein.
  
     0.573
ANL58760.1
Hypothetical protein.
  
     0.557
ANL58872.1
Tyrosine phosphatase family protein.
  
     0.549
nuoL
Protein involved in NADH dehydrogenase (ubiquinone) activity, ATP synthesis coupled electron transport and oxidation-reduction process.
       0.548
ANL61188.1
Hypothetical protein.
  
     0.544
ANL58357.1
Hypothetical protein.
  
     0.530
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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