Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ANL59110.1Protein involved in DNA mediated transformation. (380 aa)    
Predicted Functional Partners:
ANL61268.1
Protein involved in nucleoside metabolic process.
 
 
 0.865
plsY
Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
 
     0.840
ANL59426.1
ComEC/Rec2-related protein.
 
  
 0.838
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
 0.814
ANL57797.1
Mg chelatase-related protein; Protein involved in nucleotide binding, nucleoside-triphosphatase activity, photosynthesis and chlorophyll biosynthetic process.
 
 
 0.771
pyrC-2
Dihydroorotase 2; Protein involved in hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds.
 
     0.733
pyrB
Aspartate carbamoyltransferase catalytic subunit; Protein involved in carboxyl- or carbamoyltransferase activity and cellular amino acid metabolic process; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.694
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
   
 0.649
ANL59323.1
RadC-like JAB domain-containing protein; Belongs to the UPF0758 family.
  
  
 0.632
recJ
Protein involved in 5'-3' exonuclease activity, manganese ion binding, DNA repair and DNA recombination.
 
   
 0.612
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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