| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANL58508.1 | dnaN | AMC85_CH01090 | AMC85_CH00356 | DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in nucleic acid binding, ATP binding, ATP-dependent helicase activity and DNA recombination. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.783 |
| ANL58508.1 | rarA | AMC85_CH01090 | AMC85_CH01786 | DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in nucleic acid binding, ATP binding, ATP-dependent helicase activity and DNA recombination. | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.807 |
| ANL59175.1 | degP-3 | AMC85_CH01783 | AMC85_CH01785 | Hypothetical protein. | Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family. | 0.492 |
| ANL59175.1 | rarA | AMC85_CH01783 | AMC85_CH01786 | Hypothetical protein. | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.562 |
| degP-3 | ANL59175.1 | AMC85_CH01785 | AMC85_CH01783 | Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family. | Hypothetical protein. | 0.492 |
| degP-3 | rarA | AMC85_CH01785 | AMC85_CH01786 | Protein involved in serine-type endopeptidase activity and proteolysis; Belongs to the peptidase S1C family. | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.790 |
| dnaN | ANL58508.1 | AMC85_CH00356 | AMC85_CH01090 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in nucleic acid binding, ATP binding, ATP-dependent helicase activity and DNA recombination. | 0.783 |
| dnaN | mutY | AMC85_CH00356 | AMC85_CH01061 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.847 |
| dnaN | rarA | AMC85_CH00356 | AMC85_CH01786 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.821 |
| dnaN | recQ | AMC85_CH00356 | AMC85_CH03110 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein involved in ATP-dependent 3'-5' DNA helicase activity, ATP binding, ATP-dependent helicase activity, DNA replication and DNA repair. | 0.783 |
| dnaN | ruvA | AMC85_CH00356 | AMC85_CH03644 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.479 |
| dnaN | xseA | AMC85_CH00356 | AMC85_CH00315 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.429 |
| mutY | dnaN | AMC85_CH01061 | AMC85_CH00356 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.847 |
| mutY | rarA | AMC85_CH01061 | AMC85_CH01786 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.585 |
| mutY | recQ | AMC85_CH01061 | AMC85_CH03110 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Protein involved in ATP-dependent 3'-5' DNA helicase activity, ATP binding, ATP-dependent helicase activity, DNA replication and DNA repair. | 0.518 |
| mutY | ruvA | AMC85_CH01061 | AMC85_CH03644 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.698 |
| mutY | xseA | AMC85_CH01061 | AMC85_CH00315 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.683 |
| mutY | xseB | AMC85_CH01061 | AMC85_CH00985 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.692 |
| nadE-2 | rarA | AMC85_CH02457 | AMC85_CH01786 | NAD(+) synthetase 2; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | 0.588 |
| rarA | ANL58508.1 | AMC85_CH01786 | AMC85_CH01090 | Recombination factor protein RarA; Protein involved in four-way junction helicase activity, nucleoside-triphosphatase activity, DNA repair and DNA recombination. | DEAD/DEAH box type DNA/RNA helicase protein; Protein involved in nucleic acid binding, ATP binding, ATP-dependent helicase activity and DNA recombination. | 0.807 |
