Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANL59426.1ComEC/Rec2-related protein. (820 aa)    
Predicted Functional Partners:
ANL61268.1
Protein involved in nucleoside metabolic process.
 
  
 0.867
ANL59110.1
Protein involved in DNA mediated transformation.
 
  
 0.838
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.761
ANL58526.1
Protein involved in DNA mediated transformation.
 
  
 0.698
ANL57797.1
Mg chelatase-related protein; Protein involved in nucleotide binding, nucleoside-triphosphatase activity, photosynthesis and chlorophyll biosynthetic process.
 
  
 0.695
ANL59323.1
RadC-like JAB domain-containing protein; Belongs to the UPF0758 family.
 
  
 0.678
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.545
recJ
Protein involved in 5'-3' exonuclease activity, manganese ion binding, DNA repair and DNA recombination.
 
   
 0.528
gltA
Citrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process; Belongs to the citrate synthase family.
       0.487
ANL60650.1
Sensor histidine kinase/response regulator hybrid protein; Protein involved in signal transducer activity, signal transduction and regulation of transcription, DNA-dependent.
 
    0.482
Your Current Organism:
Rhizobium phaseoli
NCBI taxonomy Id: 396
Other names: ATCC 14482, DSM 30137, IFO 14785, JCM 20683, NBRC 14785, NRRL L-321, R. phaseoli
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